Structure of PDB 5aj4 Chain Bb

Receptor sequence
>5aj4Bb (length=354) Species: 9823 (Sus scrofa) [Search protein sequence]
RRAAPLGPMPNEDIDVSDLERLKKYRSFDRYRRRAEQEARKPHWWRTYRE
HFGEESGPKDRVDIGLPPPKVSRTQQLLERKQALRELRANVEEERAARLQ
TARIPLEAVRAEWERTCGPYHKQRLAEYCGLYRDLFHGATFVPRVPLHVA
YAVGEDDLMPVYHGNEVTPTEAAQAPEVTYEADEGSLWTLLLTNLDGHLL
EPDAEYVHWLVTNIPGNRVTEGQETCPYLPPFPARGSGFHRFAFLLFKQD
KRIDFSGDTRPSPCYQLAQRTFHTFDFYKKHQDAMTPAGLAFFQCRWDDS
VTRVFHQLLDMREPVFEFVRPPPYHPKQKRFPHRQPLRYLDRYRDSHEPT
YGIY
3D structure
PDB5aj4 The complete structure of the 55S mammalian mitochondrial ribosome.
ChainBb
Resolution3.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Bb R27 R28 R72 Y350 H351 P352 R356 H359 R360 R364 R368 T376 I379 Y380 R1 R2 R46 Y324 H325 P326 R330 H333 R334 R338 R342 T350 I353 Y354
BS02 rna Bb R52 R56 R59 R106 R26 R30 R33 R80
Gene Ontology
Cellular Component
GO:0005739 mitochondrion
GO:0005762 mitochondrial large ribosomal subunit
GO:0005829 cytosol
GO:0005840 ribosome

View graph for
Cellular Component
External links
PDB RCSB:5aj4, PDBe:5aj4, PDBj:5aj4
PDBsum5aj4
PubMed25837512
UniProtF1RW03

[Back to BioLiP]