Structure of PDB 6ydw Chain Ba

Receptor sequence

>6ydwBa (length=393) Species: 9823 (Sus scrofa) [Search protein sequence]

AYEWGVRSTRKPEPPPLDRVYEIPGLEPITYAGKMHFMPGLARPVFPPWD
PGWTHPKFRRLPPLHEHPLYKDQACYVFHQRCRLLEGVKQALWLTKTQLI
EGLPEKVLRLADDPRNHIENQDERVLNAISHARLWHSTEDIPKRETYCPV
IVDSLIQLCKSQILKHPSLARRICAQNNTLSATWNRESILLQVHGSSGAR
LNAKDPLPPVASQEEVEATKNHVLETFYPISPTMGLQECNVYDVNDDTGF
QEGYPYPCPHTLYFLESANLRPRRFQPDQLRAKMILFAFGSALAQARLLY
GNDSKVLEQPVVVQSVGTDGRLFQFLVLQLNTTDLASDEGVKNLAWVDSD
QLLYQHFWCLPVIKKKVVVEPVGPIGFQPETFRKFLALYLHGA

3D structure

PDB

6ydw Structural insights into mammalian mitochondrial translation elongation catalyzed by mtEFG1.

Chain

Resolution

4.2 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Ba	Y31 E32 W33 G34 V35 R36 S37 F66 R72 W78 H84 P85 K86 F87 R88 L90 H96 H108 R110 R112 I170 R173 H223 G264 Q266 L299 R300 P301 R302 R350 Q384 H385 W387 C388 L389 K393 K394	Y2 E3 W4 G5 V6 R7 S8 F37 R43 W49 H55 P56 K57 F58 R59 L61 H67 H79 R81 R83 I141 R144 H194 G235 Q237 L270 R271 P272 R273 R321 Q355 H356 W358 C359 L360 K364 K365

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005739	mitochondrion
GO:0005762	mitochondrial large ribosomal subunit
GO:0005840	ribosome

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:6ydw, PDBe:6ydw, PDBj:6ydw
PDBsum	6ydw
PubMed	32602580
UniProt	A0A287BIV6

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