Structure of PDB 4v9j Chain BZ

Receptor sequence
>4v9jBZ (length=185) Species: 262724 (Thermus thermophilus HB27) [Search protein sequence]
YRLKAYYREGEKPSALRRAGKLPGVMYNRHLNRKVYVDLVEFDKVFRQAS
IHHVIVLELPDGQSLPTLVRQVNLDKRRRRPEHVDFFVLSDEPVEMYVPL
RFVGTPAGVRAGGVLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSLHA
SDLKLPPGVELAVSPEETIAAVVPPEDVEKLAEEA
3D structure
PDB4v9j Crystal structures of EF-G-ribosome complexes trapped in intermediate states of translocation.
ChainBZ
Resolution3.86 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BZ R10 K14 V27 Y29 R72 Q73 H85 D87 F89 R8 K12 V25 Y27 R70 Q71 H83 D85 F87
BS02 rna BZ G147 E168 G145 E166
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0008097 5S rRNA binding
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:4v9j, PDBe:4v9j, PDBj:4v9j
PDBsum4v9j
PubMed23812722
UniProtQ72IA7|RL25_THET2 Large ribosomal subunit protein bL25 (Gene Name=rplY)

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