Structure of PDB 4v90 Chain BZ

Receptor sequence
>4v90BZ (length=184) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
YRLKAYYREGEKPSALRRAGKLPGVMYNRHLNRKVYVDLVEFDKVFRQAS
IHHVIVLELPDGQSLPTLVRQVNLDKRRRRPEHVDFFVLSDEPVEMYVPL
RFVGTPAGVRAGGVLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSLHA
SDLKLPPGVELAVSPEETIAAVVPPEDVEKLAEE
3D structure
PDB4v90 Structure of EF-G-ribosome complex in a pretranslocation state.
ChainBZ
Resolution2.95 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BZ R112 I146 D148 E169 T170 V175 P176 P177 R110 I144 D146 E167 T168 V173 P174 P175
BS02 rna BZ R10 R19 Y29 N30 R31 N34 R72 Q73 R79 H85 D87 F89 R8 R17 Y27 N28 R29 N32 R70 Q71 R77 H83 D85 F87
BS03 MG BZ E185 E186 E183 E184
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0008097 5S rRNA binding
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:4v90, PDBe:4v90, PDBj:4v90
PDBsum4v90
PubMed23912278
UniProtQ5SHZ1|RL25_THET8 Large ribosomal subunit protein bL25 (Gene Name=rplY)

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