Structure of PDB 4v65 Chain BZ

Receptor sequence
>4v65BZ (length=213) Species: 2285 (Sulfolobus acidocaldarius) [Search protein sequence]
MLADKESLIEALKLALSTEYNVKRNFTQSVEIILTFKGIDKKGDLKLREI
VPLPKQPSKAKRVLVVPSSEQLEYAKKASPKVVITREELQKLQGQKRPVK
KLARQNEWFLINQESALAGRILGPALGPRGKFPTPLPNTADISEYINRFK
RSVLVKTKDQPQVQVFIGTEDKPEDLAENAIAVLNAIENKAKVETNLRNI
YVKTTGKAVKVKR
3D structure
PDB4v65 The Structure of the E. coli Ribosome Before and After Accommodation: Implications for Proofreading
ChainBZ
Resolution9.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BZ D40 K42 K43 D40 K41 K42
BS02 rna BZ M1 K5 E6 I9 E10 K13 R63 R98 K101 R105 R131 K158 Q162 P163 Q164 Q166 Y204 G210 K211 A212 K214 K216 R217 M1 K5 E6 I9 E10 K13 R62 R97 K100 R104 R129 K156 Q160 P161 Q162 Q164 Y201 G206 K207 A208 K210 K212 R213
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
GO:0006417 regulation of translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:4v65, PDBe:4v65, PDBj:4v65
PDBsum4v65
PubMed
UniProtP35024|RL1_SULAC Large ribosomal subunit protein uL1 (Gene Name=rpl1)

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