Structure of PDB 4v55 Chain BZ

Receptor sequence
>4v55BZ (length=77) Species: 562 (Escherichia coli) [Search protein sequence]
SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRV
SAKGMRVIDKKGIDTVLAELRARGEKY
3D structure
PDB4v55 Structural basis for aminoglycoside inhibition of bacterial ribosome recycling.
ChainBZ
Resolution4.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BZ S2 R3 K10 R11 T14 N16 R18 S19 H20 A21 L22 N23 T25 K26 R27 R28 F29 L30 P31 N32 H34 H36 R37 R45 R50 A53 K54 R57 K61 S1 R2 K9 R10 T13 N15 R17 S18 H19 A20 L21 N22 T24 K25 R26 R27 F28 L29 P30 N31 H33 H35 R36 R44 R49 A52 K53 R56 K60
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:4v55, PDBe:4v55, PDBj:4v55
PDBsum4v55
PubMed17660832
UniProtP0A7M2|RL28_ECOLI Large ribosomal subunit protein bL28 (Gene Name=rpmB)

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