Structure of PDB 4v56 Chain BY

Receptor sequence
>4v56BY (length=58) Species: 562 (Escherichia coli) [Search protein sequence]
AKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAIRGMINAV
SFMVKVEE
3D structure
PDB4v56 A steric block in translation caused by the antibiotic spectinomycin.
ChainBY
Resolution3.93 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BY L16 H19 F52 L16 H19 F52
BS02 rna BY S11 I13 P17 A21 T22 L24 G25 R29 R30 I31 R37 E38 A42 M46 S11 I13 P17 A21 T22 L24 G25 R29 R30 I31 R37 E38 A42 M46
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:4v56, PDBe:4v56, PDBj:4v56
PDBsum4v56
PubMed17696316
UniProtP0AG51|RL30_ECOLI Large ribosomal subunit protein uL30 (Gene Name=rpmD)

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