Structure of PDB 9f1b Chain BX

Receptor sequence

>9f1bBX (length=118) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

KIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMK
KIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYV
RLAPDYDALDVANKIGII

3D structure

PDB

9f1b NAC guides a ribosomal multienzyme complex for nascent protein processing.

Chain

Resolution

3.01 Å

3D
structure

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	BX	P44 T45 R47 R48 K50 T51 L52 R53 L54 R56 Q57 P58 K59 Y60 R62 T83 K89 N93 N105 K106 H107 K123 N125 T126 L127 I128 P130 K134 K135 Y137 R139	P6 T7 R9 R10 K12 T13 L14 R15 L16 R18 Q19 P20 K21 Y22 R24 T45 K51 N55 N67 K68 H69 K85 N87 T88 L89 I90 P92 K96 K97 Y99 R101
BS02	rna	BX	P49 T51 L52 R56 K63 P66 R67 R68 K70 H107 Q108	P11 T13 L14 R18 K25 P28 R29 R30 K32 H69 Q70

External links

PDB	RCSB:9f1b, PDBe:9f1b, PDBj:9f1b
PDBsum	9f1b
PubMed	39169182
UniProt	G1SE76\|RL23A_RABIT Large ribosomal subunit protein uL23 (Gene Name=RPL23A)