Structure of PDB 8ova Chain BW

Receptor sequence
>8ovaBW (length=136) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence]
DKANVKGCRFRVSLALPVGAVVNCADNTGAKNLYIISVKGYHGRLNRLPA
AALGDMVMASVKKGKPELRRKVLNAVIIRQRKSWRRKDGTVIYFEDNAGV
IVNPKGEMKGSGIAGPVAKEAAELWPKISTHAPAIV
3D structure
PDB8ova A single pseudouridine on rRNA regulates ribosome structure and function in the mammalian parasite Trypanosoma brucei.
ChainBW
Resolution2.47 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BW P69 R72 P66 R69
BS02 rna BW P20 A23 I39 S40 K42 G43 Y44 H45 R47 L48 N49 R50 L51 S63 K65 R73 K85 P17 A20 I36 S37 K39 G40 Y41 H42 R44 L45 N46 R47 L48 S60 K62 R70 K82
BS03 rna BW G10 R14 S16 R47 R50 G7 R11 S13 R44 R47
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8ova, PDBe:8ova, PDBj:8ova
PDBsum8ova
PubMed37985661
UniProtQ38DP2

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