Structure of PDB 4v6l Chain BV

Receptor sequence

>4v6lBV (length=103) Species: 83333 (Escherichia coli K-12) [Search protein sequence]

AAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKKHQKPVPA
LNQPGGIVEKEAAIQVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSE
TIK

3D structure

PDB

4v6l Structural insights into cognate versus near-cognate discrimination during decoding.

Chain

Resolution

13.2 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	BV	A1 K3 R5 R6 D7 L13 T14 G15 K16 K18 N26 V27 S29 V41 K42 K43 H44 Q45 K46 G56 I57 K60 Q65 S67 N68 V69 A70 K78 R81 G83 F84 R85 K90 K91 R93 K96 K103	A1 K3 R5 R6 D7 L13 T14 G15 K16 K18 N26 V27 S29 V41 K42 K43 H44 Q45 K46 G56 I57 K60 Q65 S67 N68 V69 A70 K78 R81 G83 F84 R85 K90 K91 R93 K96 K103

Gene Ontology

	Molecular Function
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome
GO:0005515	protein binding
GO:0019843	rRNA binding
GO:0070180	large ribosomal subunit rRNA binding

	Biological Process
GO:0000027	ribosomal large subunit assembly
GO:0002181	cytoplasmic translation
GO:0006412	translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

External links

PDB	RCSB:4v6l, PDBe:4v6l, PDBj:4v6l
PDBsum	4v6l
PubMed	21378755
UniProt	P60624\|RL24_ECOLI Large ribosomal subunit protein uL24 (Gene Name=rplX)