Structure of PDB 8q87 Chain BT

Receptor sequence

>8q87BT (length=159) Species: 9031 (Gallus gallus) [Search protein sequence]

TNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQQG
MPHKCYHGKTGRVYNVTQHAVGVIVNKKVKGKILAKRINVRIEHIKHSKS
RDSFLQRVKENEKKKKEAKEKGIWVQLKRQPAPPREAHFVRTNGKDPELL
EPIPYEFMA

3D structure

PDB

8q87 Structural insights into inactive ribosome complexes derived from cold-treated chick embryo cells

Chain

Resolution

2.4 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	BT	T2 N3 T4 K5 G6 K7 R8 R9 R12 Y13 S16 R17 F19 H22 G23 K35 D41 K43 G46 T47 Q49 Q50 G51 H54 K55 Y57 H58 G59 K60 T61 T68 Q69 H70 A71 N77 K78 V80 K81 K83 L85 K87 R88 N90 R92 K97 K100 S101 F105 R108 N112 E113 K116 K120 W125 V126 L128 K129 R130 F140	T1 N2 T3 K4 G5 K6 R7 R8 R11 Y12 S15 R16 F18 H21 G22 K34 D40 K42 G45 T46 Q48 Q49 G50 H53 K54 Y56 H57 G58 K59 T60 T67 Q68 H69 A70 N76 K77 V79 K80 K82 L84 K86 R87 N89 R91 K96 K99 S100 F104 R107 N111 E112 K115 K119 W124 V125 L127 K128 R129 F139
BS02	rna	BT	R20 P26 L27 A28	R19 P25 L26 A27

External links

PDB	RCSB:8q87, PDBe:8q87, PDBj:8q87
PDBsum	8q87
PubMed
UniProt	R4GIQ2

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