Structure of PDB 9f1c Chain BS

Receptor sequence

>9f1cBS (length=176) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

MKASGTLREYKVVGRCLPTPKSPAPPLYRMRIFAPNHVVAKSRFWYFVSQ
LKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDL
TTAGAVTQCYRDMGARHRARAHSIQVMKVEEMAAARCRRPAVKQFHDSRI
RFPLPHRVLRRQHKPRFSAKRPNTFF

3D structure

PDB

9f1c NAC guides a ribosomal multienzyme complex for nascent protein processing.

Chain

Resolution

3.78 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	BS	S42 R43 Y46 S49 Q50 K53 K55 K56 S57 R120 H122	S42 R43 Y46 S49 Q50 K53 K55 K56 S57 R120 H122
BS02	rna	BS	K2 S4 G5 Y63 Q66 V67 F68 K70 P72 R74 S86 R87 H91 N92 M93 Y94 R98 R111 G114 A115 R116 H117 R118 R139 H146 D147 S148 P155 H156 R157 V158 R160 R161 H163 P165 R166 A169 K170 R171 P172 N173 T174 F175 F176	K2 S4 G5 Y63 Q66 V67 F68 K70 P72 R74 S86 R87 H91 N92 M93 Y94 R98 R111 G114 A115 R116 H117 R118 R139 H146 D147 S148 P155 H156 R157 V158 R160 R161 H163 P165 R166 A169 K170 R171 P172 N173 T174 F175 F176

External links

PDB	RCSB:9f1c, PDBe:9f1c, PDBj:9f1c
PDBsum	9f1c
PubMed	39169182
UniProt	G1TTY7\|RL18A_RABIT Large ribosomal subunit protein eL20 (Gene Name=RPL18A)

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