Structure of PDB 8oiq Chain BP

Receptor sequence

>8oiqBP (length=212) Species: 9823 (Sus scrofa) [Search protein sequence]

GSKAVTRHRRVMHFERQKLMAVTEYIPPKPTINPRCLPPPPTPPQEETGL
VRLLRREIAAVFRDNRMIAVCQHVALSAEDKLLLRHQLRKHKILMKIFPN
QVLKPFLEESKYQNLLPLFVGHNLLLVSEEPKVKEMVRILKGIPFLPLLG
GCIDDTILSRQGFINYSKLPSLALVQGELVGGLTFLTAQTYSMLQHQPRQ
LTALLDQYVKQQ

3D structure

PDB

8oiq Molecular basis of translation termination at noncanonical stop codons in human mitochondria.

Chain

Resolution

3.5 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	peptide	BP	L186 Y194 L197 P198 L200 V203	L158 Y166 L169 P170 L172 V175
BS02	peptide	BP	T215 Y219 L222	T187 Y191 L194
BS03	peptide	BP	L214 T218 M221 Q225	L186 T190 M193 Q197
BS04	peptide	BP	P226 T230 L233 D234 V237 Q240	P198 T202 L205 D206 V209 Q212
BS05	rna	BP	S30 K31 V33 T34 R35 H41 K46 A106 I125 P127 N128 V148 H150	S2 K3 V5 T6 R7 H13 K18 A78 I97 P99 N100 V120 H122
BS06	FES	BP	R63 C64	R35 C36

Gene Ontology

	Cellular Component
GO:0005840	ribosome
GO:1990904	ribonucleoprotein complex

View graph for
Cellular Component

External links

PDB	RCSB:8oiq, PDBe:8oiq, PDBj:8oiq
PDBsum	8oiq
PubMed	37141370
UniProt	F1RWJ0

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