Structure of PDB 4v6m Chain BP

Receptor sequence
>4v6mBP (length=114) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
SNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIR
NRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLR
ERTGKAARIKERLN
3D structure
PDB4v6m Cryo-EM structure of the ribosome-SecYE complex in the membrane environment.
ChainBP
Resolution7.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BP R38 K62 G104 K105 R108 K110 R38 K62 G104 K105 R108 K110
BS02 rna BP S1 N2 R20 I49 N51 R52 H55 V91 R92 K93 A94 K95 Y98 R102 R112 S1 N2 R20 I49 N51 R52 H55 V91 R92 K93 A94 K95 Y98 R102 R112
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:4v6m, PDBe:4v6m, PDBj:4v6m
PDBsum4v6m
PubMed21499241
UniProtP0A7K6|RL19_ECOLI Large ribosomal subunit protein bL19 (Gene Name=rplS)

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