Structure of PDB 4v6d Chain BP

Receptor sequence
>4v6dBP (length=114) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
SNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIR
NRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLR
ERTGKAARIKERLN
3D structure
PDB4v6d Structures of the ribosome in intermediate States of ratcheting.
ChainBP
Resolution3.814 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BP E33 S35 K36 R38 K105 R108 E33 S35 K36 R38 K105 R108
BS02 rna BP R20 R50 N51 R52 H55 Q74 R92 K93 A94 K95 Y97 Y98 R102 R20 R50 N51 R52 H55 Q74 R92 K93 A94 K95 Y97 Y98 R102
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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External links
PDB RCSB:4v6d, PDBe:4v6d, PDBj:4v6d
PDBsum4v6d
PubMed19696352
UniProtP0A7K6|RL19_ECOLI Large ribosomal subunit protein bL19 (Gene Name=rplS)

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