Structure of PDB 6ztm Chain BO

Receptor sequence

>6ztmBO (length=120) Species: 562 (Escherichia coli) [Search protein sequence]

MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEP
LITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKC
GFRAGDNAPMAYIELVDRSE

3D structure

PDB

6ztm Structural basis of transcription-translation coupling and collision in bacteria.

Chain

Resolution

3.3 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	BO	M1 R2 H3 R4 K5 S6 R8 Q9 N11 R12 S14 H16 R22 N23 I34 T36 T37 P39 K40 K42 R46 E49 T53 R63 R64 F67 A68 R71 N73 E74 R90 A91 G92 G93 R96 K99 R103 G105 D106 N107 A108	M1 R2 H3 R4 K5 S6 R8 Q9 N11 R12 S14 H16 R22 N23 I34 T36 T37 P39 K40 K42 R46 E49 T53 R63 R64 F67 A68 R71 N73 E74 R90 A91 G92 G93 R96 K99 R103 G105 D106 N107 A108
BS02	MG	BO	Q9 L10 N11 R12	Q9 L10 N11 R12

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome
GO:0005515	protein binding

	Biological Process
GO:0000027	ribosomal large subunit assembly
GO:0002181	cytoplasmic translation
GO:0006412	translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

External links

PDB	RCSB:6ztm, PDBe:6ztm, PDBj:6ztm
PDBsum	6ztm
PubMed	32820062
UniProt	P0AG44\|RL17_ECOLI Large ribosomal subunit protein bL17 (Gene Name=rplQ)