Structure of PDB 4v78 Chain BO

Receptor sequence
>4v78BO (length=116) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
DKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNGSEVLVAA
STVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHG
RVQALADAAREAGLQF
3D structure
PDB4v78 Energy barriers and driving forces in tRNA translocation through the ribosome.
ChainBO
Resolution20.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BO R9 R10 R13 R16 K17 Y99 R8 R9 R12 R15 K16 Y98
BS02 rna BO D2 K3 K4 P32 R33 G44 K63 Y64 N67 K68 Q98 H100 G101 R102 D1 K2 K3 P31 R32 G43 K62 Y63 N66 K67 Q97 H99 G100 R101
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0008097 5S rRNA binding
GO:0019843 rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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External links
PDB RCSB:4v78, PDBe:4v78, PDBj:4v78
PDBsum4v78
PubMed24186064
UniProtP0C018|RL18_ECOLI Large ribosomal subunit protein uL18 (Gene Name=rplR)

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