Structure of PDB 4v71 Chain BO

Receptor sequence
>4v71BO (length=116) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
DKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNGSEVLVAA
STVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHG
RVQALADAAREAGLQF
3D structure
PDB4v71 Energy barriers and driving forces in tRNA translocation through the ribosome.
ChainBO
Resolution20.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BO R9 R10 R13 R16 K17 L18 L21 R94 Y99 R8 R9 R12 R15 K16 L17 L20 R93 Y98
BS02 rna BO K3 R10 R15 H29 R30 T31 R33 H34 Y36 Q38 I40 G44 V54 E55 K56 Y64 Q98 H100 R102 K2 R9 R14 H28 R29 T30 R32 H33 Y35 Q37 I39 G43 V53 E54 K55 Y63 Q97 H99 R101
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0008097 5S rRNA binding
GO:0019843 rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4v71, PDBe:4v71, PDBj:4v71
PDBsum4v71
PubMed24186064
UniProtP0C018|RL18_ECOLI Large ribosomal subunit protein uL18 (Gene Name=rplR)

[Back to BioLiP]