Structure of PDB 4v5y Chain BO

Receptor sequence
>4v5yBO (length=116) Species: 562 (Escherichia coli) [Search protein sequence]
DKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNGSEVLVAA
STVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHG
RVQALADAAREAGLQF
3D structure
PDB4v5y Structural basis for aminoglycoside inhibition of bacterial ribosome recycling.
ChainBO
Resolution4.45 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BO K4 R15 R25 V27 H29 R30 T31 R33 H34 Y36 Q38 I40 G44 S45 V47 V54 Y64 G66 N67 K68 Q98 H100 G101 R102 K3 R14 R24 V26 H28 R29 T30 R32 H33 Y35 Q37 I39 G43 S44 V46 V53 Y63 G65 N66 K67 Q97 H99 G100 R101
BS02 rna BO R9 R13 K17 L21 Y99 R8 R12 K16 L20 Y98
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0008097 5S rRNA binding
GO:0019843 rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:4v5y, PDBe:4v5y, PDBj:4v5y
PDBsum4v5y
PubMed17660832
UniProtP0C018|RL18_ECOLI Large ribosomal subunit protein uL18 (Gene Name=rplR)

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