Structure of PDB 6gaw Chain BN

Receptor sequence
>6gawBN (length=177) Species: 9823 (Sus scrofa) [Search protein sequence]
SSFSKAPQQWATFARVWYLLDGKMQPPGKLAAMASVKLQGLHKPVYHQLS
DCGDHVVIMNTRHIAFSGNKWEQKVYSSHTGYPGGFRQVTAAQLHQKDPV
AIVKLAIYGMLPKNLHRRTMMQRLHLFPDEDIPEDILKNLVEELPQPRKV
PRRLDEYTQEEIEAFPRVWSPPEDYRL
3D structure
PDB6gaw Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM.
ChainBN
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BN P28 G29 K30 Q49 L50 S68 K71 K75 S78 H80 G85 F87 R88 K98 G110 M111 K114 N115 L116 H117 R118 R119 Y176 R177 P27 G28 K29 Q48 L49 S67 K70 K74 S77 H79 G84 F86 R87 K97 G109 M110 K113 N114 L115 H116 R117 R118 Y175 R176
Gene Ontology
Molecular Function
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
GO:0017148 negative regulation of translation
Cellular Component
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005761 mitochondrial ribosome
GO:0005762 mitochondrial large ribosomal subunit
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:6gaw, PDBe:6gaw, PDBj:6gaw
PDBsum6gaw
PubMed30089917
UniProtK7GP19

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