Structure of PDB 4v4v Chain BM

Receptor sequence
>4v4vBM (length=113) Species: 562 (Escherichia coli) [Search protein sequence]
KKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNGSEVLVAAS
TVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGR
VQALADAAREAGL
3D structure
PDB4v4v Elongation arrest by SecM via a cascade of ribosomal RNA rearrangements
ChainBM
Resolution15.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BM R10 A11 K17 R8 A9 K15
BS02 rna BM R33 N43 E46 Y64 F97 Q98 R102 R31 N41 E44 Y62 F95 Q96 R100
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0008097 5S rRNA binding
GO:0019843 rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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External links
PDB RCSB:4v4v, PDBe:4v4v, PDBj:4v4v
PDBsum4v4v
PubMed16713583
UniProtP0C018|RL18_ECOLI Large ribosomal subunit protein uL18 (Gene Name=rplR)

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