Structure of PDB 8ove Chain BL

Receptor sequence
>8oveBL (length=156) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence]
ANPMREIVVKKLCINICVGESGDRLTRASKVLEQLCEQTPVLSRANEKIA
VHCTVRGKKAEELLEKGLKVKEFELKSYNFSDTGSFGFGISEHIDLGIKY
DPSTGIYGMDFYVVLGRRGERVAHRKRRVSRVGFNHRVRKEEAMKWFEKV
HDGIIF
3D structure
PDB8ove A single pseudouridine on rRNA regulates ribosome structure and function in the mammalian parasite Trypanosoma brucei.
ChainBL
Resolution2.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BL K23 N27 S55 N102 D105 G110 F111 Y135 R154 K11 N15 S43 N79 D82 G87 F88 Y112 R131
BS02 rna BL N14 Q50 T51 V53 T77 R79 R141 R144 R148 S153 R154 V155 H159 N2 Q38 T39 V41 T54 R56 R118 R121 R125 S130 R131 V132 H136
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
Biological Process
GO:0006364 rRNA processing
GO:0006412 translation
Cellular Component
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8ove, PDBe:8ove, PDBj:8ove
PDBsum8ove
PubMed37985661
UniProtQ38EI9

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