Structure of PDB 6skf Chain BL

Receptor sequence
>6skfBL (length=140) Species: 311400 (Thermococcus kodakarensis) [Search protein sequence]
AKKGAGATRGISPVRPTRALPIGAYLKVADNSGAKVIQIIGVVGYKGTRR
RLAAAGVGDMVVATVKKGRPDMRHQVVRAVVVRQRKEYRRLDGMRVKFED
NAAAIVTPEGVPRGTEIRGAIAREAAERWVRLGSIASIVL
3D structure
PDB6skf Dynamic RNA acetylation revealed by quantitative cross-evolutionary mapping.
ChainBL
Resolution2.95 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BL A2 K3 T18 P22 G24 A25 Y26 K47 T49 R50 R51 R52 L53 T65 R86 K87 R96 A1 K2 T17 P21 G23 A24 Y25 K46 T48 R49 R50 R51 L52 T64 R85 K86 R95
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:6skf, PDBe:6skf, PDBj:6skf
PDBsum6skf
PubMed32555463
UniProtQ5JJF8|RL14_THEKO Large ribosomal subunit protein uL14 (Gene Name=rpl14)

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