Structure of PDB 4v5e Chain BK

Receptor sequence
>4v5eBK (length=140) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
MKKVVAVVKLQLPAGKATPAPPVGPALGQHGANIMEFVKAFNAATANMGD
AIVPVEITIYADRSFTFVTKTPPASYLIRKAAGLEKGAHKPGREKVGRIT
WEQVLEIAKQKMPDLNTTDLEAAARMIAGSARSMGVEVVG
3D structure
PDB4v5e Insights Into Translational Termination from the Structure of Rf2 Bound to the Ribosome.
ChainBK
Resolution3.45 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BK M1 K9 L10 Q11 P73 A74 S75 K86 G87 H89 K90 P91 G92 K111 N116 T117 A122 R125 M126 G129 S130 R132 S133 M134 M1 K9 L10 Q11 P73 A74 S75 K86 G87 H89 K90 P91 G92 K111 N116 T117 A122 R125 M126 G129 S130 R132 S133 M134
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:4v5e, PDBe:4v5e, PDBj:4v5e
PDBsum4v5e
PubMed18988853
UniProtQ5SLP6|RL11_THET8 Large ribosomal subunit protein uL11 (Gene Name=rplK)

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