Structure of PDB 8q87 Chain BJ

Receptor sequence

>8q87BJ (length=170) Species: 9031 (Gallus gallus) [Search protein sequence]

KENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTV
RSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGF
GIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGNIGAKHRI
GKEEAMRWFQQKYDGIILPG

3D structure

PDB

8q87 Structural insights into inactive ribosome complexes derived from cold-treated chick embryo cells

Chain

Resolution

2.4 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	BJ	K19 C21 N23 C25 G27 S51 A53 R54 F60 A69 H71 N97 N98 S100 D101 T102 N104 G106 F107 G108 G127 L128 D129 Y131 K145	K12 C14 N16 C18 G20 S44 A46 R47 F53 A62 H64 N90 N91 S93 D94 T95 N97 G99 F100 G101 G120 L121 D122 Y124 K138
BS02	rna	BJ	N10 M12 R13 Q46 T47 V49 T73 R75 G138 S140 I141 K144 K145 N150 I151 A153 K154 H155 R156	N3 M5 R6 Q39 T40 V42 T66 R68 G131 S133 I134 K137 K138 N143 I144 A146 K147 H148 R149

External links

PDB	RCSB:8q87, PDBe:8q87, PDBj:8q87
PDBsum	8q87
PubMed
UniProt	A0A1D5P3B1

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