Structure of PDB 4v76 Chain BJ

Receptor sequence
>4v76BJ (length=142) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDT
GDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERV
IEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI
3D structure
PDB4v76 Energy barriers and driving forces in tRNA translocation through the ribosome.
ChainBJ
Resolution17.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BJ M1 K2 P8 R13 R37 K39 H47 K68 K72 Y74 Y75 H76 H77 I84 K85 R95 R96 R99 E102 G107 M108 K111 L114 R120 N131 H132 A134 Q135 M1 K2 P8 R13 R37 K39 H47 K68 K72 Y74 Y75 H76 H77 I84 K85 R95 R96 R99 E102 G107 M108 K111 L114 R120 N131 H132 A134 Q135
Gene Ontology
Molecular Function
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
GO:0008270 zinc ion binding
GO:0048027 mRNA 5'-UTR binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0017148 negative regulation of translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:4v76, PDBe:4v76, PDBj:4v76
PDBsum4v76
PubMed24186064
UniProtP0AA10|RL13_ECOLI Large ribosomal subunit protein uL13 (Gene Name=rplM)

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