Structure of PDB 4v72 Chain BJ

Receptor sequence
>4v72BJ (length=142) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDT
GDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERV
IEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI
3D structure
PDB4v72 Energy barriers and driving forces in tRNA translocation through the ribosome.
ChainBJ
Resolution13.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BJ K2 T3 F4 T5 K7 K12 T30 R37 H47 Y53 K72 H76 H77 T78 H80 I81 G82 R95 R96 R99 E102 M108 R116 R120 K123 N131 H132 A134 Q135 K2 T3 F4 T5 K7 K12 T30 R37 H47 Y53 K72 H76 H77 T78 H80 I81 G82 R95 R96 R99 E102 M108 R116 R120 K123 N131 H132 A134 Q135
Gene Ontology
Molecular Function
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
GO:0008270 zinc ion binding
GO:0048027 mRNA 5'-UTR binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0017148 negative regulation of translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4v72, PDBe:4v72, PDBj:4v72
PDBsum4v72
PubMed24186064
UniProtP0AA10|RL13_ECOLI Large ribosomal subunit protein uL13 (Gene Name=rplM)

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