Structure of PDB 9f1b Chain BI

Receptor sequence

>9f1bBI (length=213) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

GRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGH
MVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINK
MLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVVEA
LRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIP
NRGPLDKWRALHS

3D structure

PDB

9f1b NAC guides a ribosomal multienzyme complex for nascent protein processing.

Chain

Resolution

3.01 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	BI	R110 L111	R109 L110
BS02	rna	BI	R3 R4 A6 R7 C8 K13 N14 K15 P16 Y17 F22 R24 K30 D35 S61 E63 A64 A67 K74 R90 H92 F94 R98 C105 G107 A108 R110 Q112 G114 M115 R116 A118 F119 Q133 F157 K158 P160 D193 G194 K198	R2 R3 A5 R6 C7 K12 N13 K14 P15 Y16 F21 R23 K29 D34 S60 E62 A63 A66 K73 R89 H91 F93 R97 C104 G106 A107 R109 Q111 G113 M114 R115 A117 F118 Q132 F156 K157 P159 D192 G193 K197
BS03	rna	BI	Y11 E56 Y57 I131 Y199 N202 R203 G204 P205 L206 W209	Y10 E55 Y56 I130 Y198 N201 R202 G203 P204 L205 W208

External links

PDB	RCSB:9f1b, PDBe:9f1b, PDBj:9f1b
PDBsum	9f1b
PubMed	39169182
UniProt	B7NZQ2\|RL10_RABIT Large ribosomal subunit protein uL16 (Gene Name=RPL10)

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