Structure of PDB 8q87 Chain BI

Receptor sequence

>8q87BI (length=213) Species: 9031 (Gallus gallus) [Search protein sequence]

GRRPPRCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKAKVDEFPLCGH
MVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINK
MLSCAGADRLQTGMRGAFGKPQGTVARVHMGQVIMSIRTKAQNKEHVVEA
LRRAKFKFPGRQKIHISKKWGFTKFNADAFEEMVAQKRLIPDGCGVKYVP
GRGPLDRWRALHA

3D structure

PDB

8q87 Structural insights into inactive ribosome complexes derived from cold-treated chick embryo cells

Chain

Resolution

2.4 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	BI	R3 R4 P5 P6 R7 C8 K13 N14 K15 P16 Y17 F22 R24 D35 K39 K40 S61 E63 A64 A67 R90 H92 F94 R98 N100 M102 R110 G114 M115 R116 A118 F119 G120 Q133 F157 K158 P160 R162 D193 G194 K198	R2 R3 P4 P5 R6 C7 K12 N13 K14 P15 Y16 F21 R23 D34 K38 K39 S60 E62 A63 A66 R89 H91 F93 R97 N99 M101 R109 G113 M114 R115 A117 F118 G119 Q132 F156 K157 P159 R161 D192 G193 K197
BS02	rna	BI	Y11 E56 Y57 M131 Y199 G202 R203 G204 L206 W209	Y10 E55 Y56 M130 Y198 G201 R202 G203 L205 W208
BS03	MG	BI	K156 Q163	K155 Q162

External links

PDB	RCSB:8q87, PDBe:8q87, PDBj:8q87
PDBsum	8q87
PubMed
UniProt	Q08200\|RL10_CHICK Large ribosomal subunit protein uL16 (Fragment) (Gene Name=RPL10)

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