Structure of PDB 4v6o Chain BI

Receptor sequence

>4v6oBI (length=149) Species: 562 (Escherichia coli) [Search protein sequence]

MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEAR
RAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIA
DAVTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE

3D structure

PDB

4v6o Structural characterization of mRNA-tRNA translocation intermediates.

Chain

Resolution

14.7 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	BI	M1 Q2 N11 Q18 K22 A23 G24 T40 K41 K42 E45 F46 N73 T96 R97 D98 A100 D101 V108 E109 K112 S113 E114 V115 Q133 S136 E137 V138 F139	M1 Q2 N11 Q18 K22 A23 G24 T40 K41 K42 E45 F46 N73 T96 R97 D98 A100 D101 V108 E109 K112 S113 E114 V115 Q133 S136 E137 V138 F139

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome
GO:0005515	protein binding
GO:0019843	rRNA binding
GO:0070180	large ribosomal subunit rRNA binding

	Biological Process
GO:0002181	cytoplasmic translation
GO:0006412	translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:4v6o, PDBe:4v6o, PDBj:4v6o
PDBsum	4v6o
PubMed	22467828
UniProt	P0A7R1\|RL9_ECOLI Large ribosomal subunit protein bL9 (Gene Name=rplI)

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