Structure of PDB 4u25 Chain BH

Receptor sequence
>4u25BH (length=149) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEAR
RAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIA
DAVTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE
3D structure
PDB4u25 Synergy of streptogramin antibiotics occurs independently of their effects on translation.
ChainBH
Resolution2.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BH N11 K22 G24 Y25 R27 N28 F29 N11 K22 G24 Y25 R27 N28 F29
BS02 rna BH K83 G85 D86 K89 L90 F91 G92 S93 I94 G95 R97 L122 R123 K83 G85 D86 K89 L90 F91 G92 S93 I94 G95 R97 L122 R123
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4u25, PDBe:4u25, PDBj:4u25
PDBsum4u25
PubMed24957822
UniProtP0A7R1|RL9_ECOLI Large ribosomal subunit protein bL9 (Gene Name=rplI)

[Back to BioLiP]