Structure of PDB 6skf Chain BG

Receptor sequence
>6skfBG (length=183) Species: 311400 (Thermococcus kodakarensis) [Search protein sequence]
PVDAWIREEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDG
KVVIYKEFPRKKDVAIVRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMTV
KVQGDEVVIENFLGEKNPRRAKILPGVTVKVKGSEIEVEGIDKEAVGQTA
ANIEQATRITKWDRRVFQDGIYIVEKAGKPIKF
3D structure
PDB6skf Dynamic RNA acetylation revealed by quantitative cross-evolutionary mapping.
ChainBG
Resolution2.95 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BG R61 K62 K63 A66 T70 A73 F97 E116 K117 N118 K144 E145 G148 Q149 Q156 R159 T161 D164 V167 K177 R60 K61 K62 A65 T69 A72 F96 E115 K116 N117 K143 E144 G147 Q148 Q155 R158 T160 D163 V166 K176
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:6skf, PDBe:6skf, PDBj:6skf
PDBsum6skf
PubMed32555463
UniProtQ5JJG4|RL6_THEKO Large ribosomal subunit protein uL6 (Gene Name=rpl6)

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