Structure of PDB 8ewb Chain BF

Receptor sequence
>8ewbBF (length=206) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
FTPVVLATPIPEEVQQAQTEIKLFNKWSFEEVEVKDASLVDYVQVRQPIF
VAHTAGRYANKRFRKAQCPIIERLTNSLMMNGRNNGKKLKAVRIIKHTLD
IINVLTDQNPIQVVVDAITNTGPREDTTRVGGGGAARRQAVDVSPLRRVN
QAIALLTIGAREAAFRNIKTIAETLAEELINAAKGSSTSYAIKKKDELER
VAKSNR
3D structure
PDB8ewb Regulation of translation by ribosomal RNA pseudouridylation.
ChainBF
Resolution2.87 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BF H72 A78 K80 R81 K84 R92 N95 M99 N100 G101 R102 N103 N104 K106 K107 K109 R112 R166 N169 R180 F184 R185 N186 I187 I190 H53 A59 K61 R62 K65 R73 N76 M80 N81 G82 R83 N84 N85 K87 K88 K90 R93 R147 N150 R161 F165 R166 N167 I168 I171
BS02 rna BF G153 A154 G134 A135
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8ewb, PDBe:8ewb, PDBj:8ewb
PDBsum8ewb
PubMed37595043
UniProtA0A1L4AA68

[Back to BioLiP]