Structure of PDB 6ztn Chain BF

Receptor sequence
>6ztnBF (length=178) Species: 562 (Escherichia coli) [Search protein sequence]
AKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLD
NAAADLAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFE
RLITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRG
LDITITTTAKSDEEGRALLAAFDFPFRK
3D structure
PDB6ztn Structural basis of transcription-translation coupling and collision in bacteria.
ChainBF
Resolution3.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BF S73 A75 R80 S72 A74 R79
BS02 rna BF K33 N37 M38 G39 V40 T68 R71 K72 F77 I79 I85 K88 S121 R125 S129 M130 R133 G151 K32 N36 M37 G38 V39 T67 R70 K71 F76 I78 I84 K87 S120 R124 S128 M129 R132 G150
BS03 rna BF S24 M26 K64 K69 T90 R92 S23 M25 K63 K68 T89 R91
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0008097 5S rRNA binding
GO:0019843 rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:6ztn, PDBe:6ztn, PDBj:6ztn
PDBsum6ztn
PubMed32820062
UniProtP62399|RL5_ECOLI Large ribosomal subunit protein uL5 (Gene Name=rplE)

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