Structure of PDB 4v9e Chain BF

Receptor sequence
>4v9eBF (length=241) Species: 11588 (Rift Valley fever virus) [Search protein sequence]
QELAIQFAAQAVDRNEIEQWVREFAYQGFDARRVIELLKQYGGADWEKDA
KKMIVLALTRGNKPRRMMMKMSKEGKATVEALINKYKLKEGNPSRDELTL
SRVAAALAGRTCQALVVLSEWLPVTGTTMDGLSPAYPRHMMHPSFAGMVD
PSLPGDYLRAILDAHSLYLLQFSRVINPNLRGRTKEEVAATFTQPMNAAV
NSNFISHEKRREFLKAFGLVDSNGKPSAAVMAAAQAYKTAA
3D structure
PDB4v9e Phleboviruses encapsidate their genomes by sequestering RNA bases.
ChainBF
Resolution3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BF Y30 G32 F33 G65 K67 R70 G95 N96 S105 R106 V179 I180 N181 F196 Q198 P199 A202 A203 Y26 G28 F29 G61 K63 R66 G91 N92 S101 R102 V175 I176 N177 F192 Q194 P195 A198 A199
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0042802 identical protein binding
Cellular Component
GO:0019013 viral nucleocapsid
GO:0019028 viral capsid
GO:0030430 host cell cytoplasm
GO:0042025 host cell nucleus
GO:0044172 host cell endoplasmic reticulum-Golgi intermediate compartment
GO:0044177 host cell Golgi apparatus
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:4v9e, PDBe:4v9e, PDBj:4v9e
PDBsum4v9e
PubMed23129612
UniProtD3K5I7|NCAP_RVFV Nucleoprotein (Gene Name=N)

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