Structure of PDB 4v85 Chain BF

Receptor sequence
>4v85BF (length=177) Species: 562 (Escherichia coli) [Search protein sequence]
AKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLD
NAAADLAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFE
RLITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRG
LDITITTTAKSDEEGRALLAAFDFPFR
3D structure
PDB4v85 Crystal structure of release factor RF3 trapped in the GTP state on a rotated conformation of the ribosome.
ChainBF
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BF N36 M37 G38 V39 G40 T67 R70 F76 I78 I84 K87 S120 D122 R124 G130 R132 R149 G150 L151 D152 N36 M37 G38 V39 G40 T67 R70 F76 I78 I84 K87 S120 D122 R124 G130 R132 R149 G150 L151 D152
BS02 rna BF S23 M25 Q26 K63 K68 V88 T89 R91 S23 M25 Q26 K63 K68 V88 T89 R91
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0008097 5S rRNA binding
GO:0019843 rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:4v85, PDBe:4v85, PDBj:4v85
PDBsum4v85
PubMed22187675
UniProtP62399|RL5_ECOLI Large ribosomal subunit protein uL5 (Gene Name=rplE)

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