Structure of PDB 4v6z Chain BF

Receptor sequence
>4v6zBF (length=178) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
AKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLD
NAAADLAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFE
RLITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRG
LDITITTTAKSDEEGRALLAAFDFPFRK
3D structure
PDB4v6z Energy barriers and driving forces in tRNA translocation through the ribosome.
ChainBF
Resolution12.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BF T34 N36 G40 E41 K71 G75 F76 K87 K119 R132 R149 G150 D152 T34 N36 G40 E41 K71 G75 F76 K87 K119 R132 R149 G150 D152
BS02 rna BF N22 S23 M25 Q26 Q62 K63 L65 K68 K87 V88 T89 R91 K160 N22 S23 M25 Q26 Q62 K63 L65 K68 K87 V88 T89 R91 K160
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0008097 5S rRNA binding
GO:0019843 rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:4v6z, PDBe:4v6z, PDBj:4v6z
PDBsum4v6z
PubMed24186064
UniProtP62399|RL5_ECOLI Large ribosomal subunit protein uL5 (Gene Name=rplE)

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