Structure of PDB 4v69 Chain BF

Receptor sequence

>4v69BF (length=178) Species: 562 (Escherichia coli) [Search protein sequence]

AKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLD
NAAADLAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFE
RLITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRG
LDITITTTAKSDEEGRALLAAFDFPFRK

3D structure

PDB

4v69 Ribosome-induced changes in elongation factor Tu conformation control GTP hydrolysis

Chain

Resolution

6.7 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	BF	A74 R79 Q80	A74 R79 Q80
BS02	rna	BF	L35 N36 V39 G40 A69 R70 K71 F76 I78 I84 K87 K119 S120 F121 D122 R124 N126 S128 G130 R132 V148 R149 G150 D152 T154	L35 N36 V39 G40 A69 R70 K71 F76 I78 I84 K87 K119 S120 F121 D122 R124 N126 S128 G130 R132 V148 R149 G150 D152 T154
BS03	rna	BF	S23 M25 Q26 K32 Q62 L65 V88 T89 R91	S23 M25 Q26 K32 Q62 L65 V88 T89 R91

Gene Ontology

	Molecular Function
GO:0000049	tRNA binding
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome
GO:0008097	5S rRNA binding
GO:0019843	rRNA binding

	Biological Process
GO:0000027	ribosomal large subunit assembly
GO:0002181	cytoplasmic translation
GO:0006412	translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:4v69, PDBe:4v69, PDBj:4v69
PDBsum	4v69
PubMed	19122150
UniProt	P62399\|RL5_ECOLI Large ribosomal subunit protein uL5 (Gene Name=rplE)

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