Structure of PDB 8bpx Chain BD

Receptor sequence
>8bpxBD (length=195) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
VPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLSGGRFVYASV
LRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIRR
RTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNA
GDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLI
3D structure
PDB8bpx Cryo-EM structure of the respiratory I + III 2 supercomplex from Arabidopsis thaliana at 2 angstrom resolution.
ChainBD
Resolution2.09 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 7.1.1.8: quinol--cytochrome-c reductase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide BD A124 R128 A48 R52
BS02 FES BD C215 H217 L218 C220 C234 C236 H237 S239 C139 H141 L142 C144 C158 C160 H161 S163
Gene Ontology
Molecular Function
GO:0008121 ubiquinol-cytochrome-c reductase activity
GO:0046872 metal ion binding
GO:0051537 2 iron, 2 sulfur cluster binding
Biological Process
GO:1902600 proton transmembrane transport
Cellular Component
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0009536 plastid
GO:0016020 membrane
GO:0031966 mitochondrial membrane
GO:0045275 respiratory chain complex III

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8bpx, PDBe:8bpx, PDBj:8bpx
PDBsum8bpx
PubMed36585502
UniProtQ94JS0|UCRI1_ARATH Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Gene Name=UCR1-1)

[Back to BioLiP]