Structure of PDB 4v8k Chain BD
Receptor sequence
>4v8kBD (length=45) Species:
1050
(Thermochromatium tepidum) [
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LYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIP
3D structure
PDB
4v8k
Structure of the LH1-RC complex from Thermochromatium tepidum at 3.0 angstrom
Chain
BD
Resolution
3.006 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
CRT
BD
I24 L31 I35 I38
I17 L24 I28 I31
BS02
CRT
BD
L33 H36 M37
L26 H29 M30
BS03
CA
BD
W46 L47 D49 N50 I51
W39 L40 D42 N43 I44
BS04
BCL
BD
Q28 I29 H36 W46
Q21 I22 H29 W39
BS05
BCL
BD
Q28 L31 G32 I35 H36
Q21 L24 G25 I28 H29
Gene Ontology
Molecular Function
GO:0005515
protein binding
GO:0042314
bacteriochlorophyll binding
GO:0045156
electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
GO:0046872
metal ion binding
Biological Process
GO:0019684
photosynthesis, light reaction
Cellular Component
GO:0005886
plasma membrane
GO:0016020
membrane
GO:0019866
organelle inner membrane
GO:0030076
light-harvesting complex
GO:0030077
plasma membrane light-harvesting complex
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4v8k
,
PDBe:4v8k
,
PDBj:4v8k
PDBsum
4v8k
PubMed
24670637
UniProt
D2Z0P2
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