Structure of PDB 4v66 Chain BD

Receptor sequence
>4v66BD (length=121) Species: 562 (Escherichia coli) [Search protein sequence]
IQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGK
VKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFG
PVTRELRSEKFMKIISLAPEV
3D structure
PDB4v66 The Structure of the E. coli Ribosome Before and After Accommodation: Implications for Proofreading
ChainBD
Resolution9.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BD R98 F100 P120 E121 V122 R97 F99 P119 E120 V121
BS02 rna BD Q5 M7 M20 K23 L25 G26 G27 S28 H29 R30 R31 K40 K53 K54 G55 K66 R71 Q4 M6 M19 K22 L24 G25 G26 S27 H28 R29 R30 K39 K52 K53 G54 K65 R70
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4v66, PDBe:4v66, PDBj:4v66
PDBsum4v66
PubMed
UniProtP0ADY3|RL14_ECOLI Large ribosomal subunit protein uL14 (Gene Name=rplN)

[Back to BioLiP]