Structure of PDB 4v4f Chain BD

Receptor sequence
>4v4fBD (length=71) Species: 1422 (Geobacillus stearothermophilus) [Search protein sequence]
TNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSA
IKVRGKAYIQTRHGVIESEGK
3D structure
PDB4v4f The Interaction of RNA with Trap: The Role of Triplet Repeats and Separating Spacer Nucleotides
ChainBD
Resolution1.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BD F32 K56 F28 K52
BS02 rna BD E36 K37 E32 K33
BS03 TRP BD T25 G27 D29 T30 S53 T21 G23 D25 T26 S49
BS04 TRP BD G23 A46 Q47 T49 I55 G19 A42 Q43 T45 I51
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0042802 identical protein binding
Biological Process
GO:0006353 DNA-templated transcription termination
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:4v4f, PDBe:4v4f, PDBj:4v4f
PDBsum4v4f
PubMed15050822
UniProtQ9X6J6|MTRB_GEOSE Transcription attenuation protein MtrB (Gene Name=mtrB)

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