Structure of PDB 6j5k Chain BC

Receptor sequence
>6j5kBC (length=502) Species: 9823 (Sus scrofa) [Search protein sequence]
SSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSG
LKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVV
DALGNAIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVP
IGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQ
KRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFR
DNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER
AAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFY
KGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGS
DLDAATQQLLSRGVRLTELLKQGQYAPMAIEEQVAVIYAGVRGYLDKLEP
SKITKFENAFLSHVISQHQALLGKIRADGKISEETDAKLKEIVTNFLAGF
EA
3D structure
PDB6j5k Cryo-EM structure of the mammalian ATP synthase tetramer bound with inhibitory protein IF1.
ChainBC
Resolution6.2 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) K175 Q208 K209 R373
Catalytic site (residue number reindexed from 1) K167 Q200 K201 R365
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP BC R171 Q172 T176 S177 F357 R362 G431 Q432 R163 Q164 T168 S169 F349 R354 G423 Q424
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0032559 adenyl ribonucleotide binding
GO:0043531 ADP binding
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
Biological Process
GO:0006754 ATP biosynthetic process
GO:0015986 proton motive force-driven ATP synthesis
GO:0046034 ATP metabolic process
GO:1902600 proton transmembrane transport
Cellular Component
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005886 plasma membrane
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
GO:0045267 proton-transporting ATP synthase, catalytic core

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6j5k, PDBe:6j5k, PDBj:6j5k
PDBsum6j5k
PubMed31197009
UniProtP80021|ATPA_PIG ATP synthase subunit alpha, mitochondrial (Gene Name=ATP5F1A)

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