Structure of PDB 7ryk Chain BBB

Receptor sequence
>7rykBBB (length=129) Species: 9031 (Gallus gallus) [Search protein sequence]
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGS
TDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVS
DGNGMNAWVAWRNRCKGTDVQAWIRGCRL
3D structure
PDB7ryk Probing ion-binding at a protein interface: Modulation of protein properties by ionic liquids.
ChainBBB
Resolution1.76 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.17: lysozyme.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NO3 BBB D66 S81 D66 S81
BS02 NO3 BBB R14 D87 I88 R14 D87 I88
BS03 NO3 BBB S24 L25 G26 Q121 I124 S24 L25 G26 Q121 I124
BS04 NO3 BBB A110 R114 A110 R114
BS05 NO3 BBB R5 K33 F38 R5 K33 F38
Gene Ontology
Molecular Function
GO:0003796 lysozyme activity
GO:0005515 protein binding
GO:0016231 beta-N-acetylglucosaminidase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0042802 identical protein binding
Biological Process
GO:0016998 cell wall macromolecule catabolic process
GO:0031640 killing of cells of another organism
GO:0042742 defense response to bacterium
GO:0050829 defense response to Gram-negative bacterium
GO:0050830 defense response to Gram-positive bacterium
Cellular Component
GO:0005576 extracellular region
GO:0005615 extracellular space
GO:0005737 cytoplasm
GO:0005783 endoplasmic reticulum

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Cellular Component
External links
PDB RCSB:7ryk, PDBe:7ryk, PDBj:7ryk
PDBsum7ryk
PubMed37480654
UniProtP00698|LYSC_CHICK Lysozyme C (Gene Name=LYZ)

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