Structure of PDB 7b4i Chain BBB

Receptor sequence
>7b4iBBB (length=452) Species: 306 (Pseudomonas sp.) [Search protein sequence]
SSLAEKDIQYQLHPYTNARLHQELGPLIIERGQGIYVYDDQGKGYIEAMA
GLGSVALGFSNQRLIKAAEQQFNTLPFYHLFNHKSHRPSIELAEKLIEMA
PVPMSKVFFTNSGSEANDTVVKFVWYLNNALGKPAKKKFISRVNGYHGVT
VASASLTGLPGNQRGFDLPLPGFLHVGCPHHYRFALAGESEEHFADRLAV
ELEQKILAEGPETIAAFIGEPLMGAGGVIVPPRTYWEKIQKVCRKYDILV
IADEVICGFGRTGQMFGSQTFGIQPDIMVLSKQLSSSYQPIAAILINAPV
FEGIADQSQALGALGHGFTGSGHPVATAVALENLKIIEEESLVEHAAQMG
QLLRSGLQHFIDHPLVGEIRGCGLIAAVELVGDRVSKAPYQALGTLGRYM
AGRAQEHGMITRAMGDAVAFCPPLIVNEQEVGMIVERFARALDDTTQWVG
PG
3D structure
PDB7b4i Computational Redesign of an omega-Transaminase from Pseudomonas jessenii for Asymmetric Synthesis of Enantiopure Bulky Amines.
ChainBBB
Resolution1.7 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 PLP BBB F323 T324 F318 T319
BS02 PLP BBB S117 G118 S119 Y151 H152 E225 D258 V260 K287 S112 G113 S114 Y146 H147 E220 D253 V255 K282
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Tue Dec 3 02:55:50 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '7b4i', asym_id = 'BBB', title = 'Computational Redesign of an omega-Transaminase ...Asymmetric Synthesis of Enantiopure Bulky Amines.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='7b4i', asym_id='BBB', title='Computational Redesign of an omega-Transaminase ...Asymmetric Synthesis of Enantiopure Bulky Amines.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0008483,0030170', uniprot = '', pdbid = '7b4i', asym_id = 'BBB'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0008483,0030170', uniprot='', pdbid='7b4i', asym_id='BBB')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>