Structure of PDB 7wg5 Chain BB

Receptor sequence
>7wg5BB (length=733) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
ALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHF
GQLAIIFLWTSGNLFHVAWQGNFETWVQDPLHVRPIAHAIWDPHFGQPAV
EAFTRGGALGPVNIAYSGVYQWWYTIGLRTNEDLYTGALFLLFLSALSLI
GGWLHLQPKWKPRVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPA
SRGEYVRWNNFLNVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGSG
TAILTLLGGFHPQTQSLWLTDMAHHHLAIAILFLIAGHMYRTNFGIGHSI
KDLLEAHIPPGGRLGRGHKGLYDTINNSIHFQLGLALASLGVITSLVAQH
MYSLPAYAFIAQDFTTQAALYTHHQYIAGFIMTGAFAHGAIFFIRDYNPE
QNEDNVLARMLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEK
QILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSIWLPGWLNAI
NENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKK
DFGYSFPCDGPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHITL
WQGNVSQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWMFL
FGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWKDKPVALS
IVQARLVGLAHFSVGYIFTYAAFLIASTSGKFG
3D structure
PDB7wg5 Supramolecular assembly of chloroplast NADH dehydrogenase-like complex with photosystem I from Arabidopsis thaliana.
ChainBB
Resolution3.89 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 1.97.1.12: photosystem I.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CLA BB W648 L651 H654 L655 W657 A658 W647 L650 H653 L654 W656 A657
BS02 CLA BB W680 R684 T685 P686 W679 R683 T684 P685
BS03 CLA BB S420 S423 W424 L427 S419 S422 W423 L426
BS04 CLA BB L678 H682 T685 L677 H681 T684
BS05 SF4 BB C559 G561 C568 C558 G560 C567
BS06 CLA BB S423 S426 L427 G430 F431 L532 I533 L578 F581 W582 S422 S425 L426 G429 F430 L531 I532 L577 F580 W581
BS07 CLA BB D441 W582 N585 W589 L616 W657 D440 W581 N584 W588 L615 W656
BS08 CLA BB L434 Y437 A522 W589 F592 L616 W619 L624 S628 F650 H654 W657 Y717 T720 Y721 F724 L433 Y436 A521 W588 F591 L615 W618 L623 S627 F649 H653 W656 Y716 T719 Y720 F723
BS09 CLA BB A658 T659 F661 M662 Y670 W671 A657 T658 F660 M661 Y669 W670
BS10 CLA BB F8 A28 H29 S49 G52 I56 F7 A27 H28 S48 G51 I55
BS11 CLA BB H29 Y43 I46 S49 H50 Q53 L54 R174 I330 H331 Q333 L334 A337 H28 Y42 I45 S48 H49 Q52 L53 R173 I329 H330 Q332 L333 A336
BS12 CLA BB H29 Q53 W60 L341 F381 H28 Q52 W59 L340 F380
BS13 CLA BB L59 W60 G63 F66 H67 W70 Q71 H89 L58 W59 G62 F65 H66 W69 Q70 H88
BS14 CLA BB N64 A88 H89 N114 A116 Y117 S118 V645 W646 M649 N63 A87 H88 N113 A115 Y116 S117 V644 W645 M648
BS15 CLA BB I91 W92 D93 H95 F96 N114 V645 W648 I90 W91 D92 H94 F95 N113 V644 W647
BS16 CLA BB P94 H95 P93 H94
BS17 CLA BB F47 F51 L155 H156 W161 W167 F46 F50 L154 H155 W160 W166
BS18 CLA BB W167 S173 H177 N294 W166 S172 H176 N293
BS19 CLA BB F47 H50 F51 L54 W123 W167 R174 H177 H178 L182 F183 F46 H49 F50 L53 W122 W166 R173 H176 H177 L181 F182
BS20 CLA BB L129 D134 T137 G138 F141 L145 A189 W190 H193 V197 R208 W209 F212 L128 D133 T136 G137 F140 L144 A188 W189 H192 V196 R207 W208 F211
BS21 CLA BB A189 T191 G192 H196 L216 P217 A188 T190 G191 H195 L215 P216
BS22 CLA BB W230 L257 H275 L278 A279 I282 I492 W229 L256 H274 L277 A278 I281 I491
BS23 CLA BB H275 H276 I280 H351 W493 W497 H274 H275 I279 H350 W492 W496
BS24 CLA BB W123 I127 F183 S186 S187 W190 M273 H276 H277 I344 L347 V348 A357 Y358 W122 I126 F182 S185 S186 W189 M272 H275 H276 I343 L346 V347 A356 Y357
BS25 CLA BB L179 F284 A287 M290 Y291 L304 L178 F283 A286 M289 Y290 L303
BS26 CLA BB N176 H177 S180 G181 V185 L285 H289 T293 F295 N175 H176 S179 G180 V184 L284 H288 T292 F294
BS27 CLA BB I286 H289 M290 I297 G298 H299 I285 H288 M289 I296 G297 H298
BS28 CLA BB H299 L304 H308 H298 L303 H307
BS29 CLA BB L305 H308 H319 L322 V407 L304 H307 H318 L321 V406
BS30 CLA BB A171 R174 L175 H178 Y323 A337 S340 I344 A170 R173 L174 H177 Y322 A336 S339 I343
BS31 CLA BB S346 L347 Q350 Q376 M383 F387 L527 T530 T531 M583 S345 L346 Q349 Q375 M382 F386 L526 T529 T530 M582
BS32 CLA BB V343 L347 H351 S354 L355 F509 V342 L346 H350 S353 L354 F508
BS33 CLA BB W60 T373 H374 Y377 F381 M649 I718 F719 A722 W59 T372 H373 Y376 F380 M648 I717 F718 A721
BS34 CLA BB W60 T61 G119 W123 S186 T345 V348 M352 Y358 L371 H374 H375 W59 T60 G118 W122 S185 T344 V347 M351 Y357 L370 H373 H374
BS35 CLA BB I25 A26 H29 D30 L334 L338 F381 G385 H389 I392 R396 Y555 W573 F576 I24 A25 H28 D29 L333 L337 F380 G384 H388 I391 R395 Y554 W572 F575
BS36 CLA BB R314 L315 V407 R410 M411 H414 I418 H421 R313 L314 V406 R409 M410 H413 I417 H420
BS37 CLA BB W424 L427 F428 F431 H432 W423 L426 F427 F430 H431
BS38 CLA BB G435 L436 V438 H439 M443 K451 G434 L435 V437 H438 M442 K450
BS39 CLA BB W462 I463 H467 L477 L478 W493 W461 I462 H466 L476 L477 W492
BS40 CLA BB A488 W493 A487 W492
BS41 CLA BB Q350 Y353 F459 A460 W462 I463 Q464 F509 L510 H520 I523 V590 Y593 W594 Q349 Y352 F458 A459 W461 I462 Q463 F508 L509 H519 I522 V589 Y592 W593
BS42 CLA BB F428 L429 P457 F459 A460 F517 H520 H521 F427 L428 P456 F458 A459 F516 H519 H520
BS43 CLA BB L422 W424 A524 L527 H528 L421 W423 A523 L526 H527
BS44 CLA BB T18 W22 L678 A679 H682 W693 P697 T17 W21 L677 A678 H681 W692 P696
BS45 CLA BB W22 L655 V656 T659 F663 V708 A711 H712 V715 W21 L654 V655 T658 F662 V707 A710 H711 V714
BS46 CLA BB H308 I309 P310 P311 R314 L315 H307 I308 P309 P310 R313 L314
BS47 PQN BB W22 M662 F663 S666 W667 R668 W671 A699 L700 A705 W21 M661 F662 S665 W666 R667 W670 A698 L699 A704
BS48 CLA BB P686 L687 P685 L686
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0003729 mRNA binding
GO:0009055 electron transfer activity
GO:0016168 chlorophyll binding
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
GO:0051539 4 iron, 4 sulfur cluster binding
Biological Process
GO:0015979 photosynthesis
Cellular Component
GO:0009507 chloroplast
GO:0009522 photosystem I
GO:0009534 chloroplast thylakoid
GO:0009535 chloroplast thylakoid membrane
GO:0009536 plastid
GO:0009579 thylakoid
GO:0009941 chloroplast envelope
GO:0016020 membrane

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7wg5, PDBe:7wg5, PDBj:7wg5
PDBsum7wg5
PubMed35123031
UniProtP56767|PSAB_ARATH Photosystem I P700 chlorophyll a apoprotein A2 (Gene Name=psaB)

[Back to BioLiP]