Structure of PDB 6j5k Chain BB

Receptor sequence
>6j5kBB (length=481) Species: 9823 (Sus scrofa) [Search protein sequence]
SVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNV
GVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPI
GSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDR
QTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLT
DADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDL
SKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL
TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSV
SRVGSAAQTRAMKQVAGTMKLELAQYREVALDAATQQLLSRGVRLTELLK
QGQYAPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVISQHQAL
LGKIRADGKISEETDAKLKEIVTNFLAGFEA
3D structure
PDB6j5k Cryo-EM structure of the mammalian ATP synthase tetramer bound with inhibitory protein IF1.
ChainBB
Resolution6.2 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) K175 Q208 K209 R373
Catalytic site (residue number reindexed from 1) K154 Q187 K188 R352
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP BB Q172 G174 K175 T176 S177 E328 Q151 G153 K154 T155 S156 E307
BS02 MG BB T176 D269 T155 D248
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0032559 adenyl ribonucleotide binding
GO:0043531 ADP binding
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
Biological Process
GO:0006754 ATP biosynthetic process
GO:0015986 proton motive force-driven ATP synthesis
GO:0046034 ATP metabolic process
GO:1902600 proton transmembrane transport
Cellular Component
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005886 plasma membrane
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
GO:0045267 proton-transporting ATP synthase, catalytic core

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6j5k, PDBe:6j5k, PDBj:6j5k
PDBsum6j5k
PubMed31197009
UniProtP80021|ATPA_PIG ATP synthase subunit alpha, mitochondrial (Gene Name=ATP5F1A)

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