Structure of PDB 4v62 Chain BB

Receptor sequence
>4v62BB (length=490) Species: 197221 (Thermosynechococcus vestitus BP-1) [Search protein sequence]
GLPWYRVHTVLINDPGRLIAAHLMHTALVAGWAGSMALYELATFDPSDPV
LNPMWRQGMFVLPFMARLGVTGSWSGWSITGETGIDPGFWSFEGVALAHI
VLSGLLFLAACWHWVYWDLELFRDPRTGEPALDLPKMFGIHLFLAGLLCF
GFGAFHLTGLFGPGMWVSDPYGLTGSVQPVAPEWGPDGFNPYNPGGVVAH
HIAAGIVGIIAGLFHILVRPPQRLYKALRMGNIETVLSSSIAAVFFAAFV
VAGTMWYGSATTPIELFGPTRYQWDSSYFQQEINRRVQASLASGATLEEA
WSAIPEKLAFYDYIGNNPAKGGLFRTGPMNKGDGIAQAWKGHAVFRNKEG
EELFVRRMPAFFESFPVILTDKNGVVKADIPFRRAESKYSFEQQGVTVSF
YGGELNGQTFTDPPTVKSYARKAIFGEIFEFDTETLNSDGIFRTSPRGWF
TFAHAVFALLFFFGHIWHGARTLFRDVFSGIDPELSPEQV
3D structure
PDB4v62 Cyanobacterial photosystem II at 2.9-A resolution and the role of quinones, lipids, channels and chloride
ChainBB
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CLA BB W185 P187 F190 I207 W184 P186 F189 I206
BS02 CLA BB G189 F190 G197 H201 A205 V208 F247 F250 G188 F189 G196 H200 A204 V207 F246 F249
BS03 CLA BB R68 L69 L149 C150 F153 V198 H201 H202 F247 A248 V252 T262 R67 L68 L148 C149 F152 V197 H200 H201 F246 A247 V251 T261
BS04 CLA BB W33 F61 F65 R68 L149 A248 A249 V252 F451 H455 F458 A459 W32 F60 F64 R67 L148 A247 A248 V251 F450 H454 F457 A458
BS05 CLA BB T27 V30 A31 W33 A34 V62 L69 H100 L103 C150 A205 T26 V29 A30 W32 A33 V61 L68 H99 L102 C149 A204
BS06 CLA BB L69 W91 A99 H100 L103 L106 L149 G152 F153 H157 F162 P164 L68 W90 A98 H99 L102 L105 L148 G151 F152 H156 F161 P163
BS07 CLA BB W33 M37 Y40 Q58 G59 F61 G328 P329 W450 F451 W32 M36 Y39 Q57 G58 F60 G327 P328 W449 F450
BS08 CLA BB A243 F463 H466 L474 A242 F462 H465 L473
BS09 CLA BB F139 A212 F215 H216 P221 P222 L229 F138 A211 F214 H215 P220 P221 L228
BS10 CLA BB L135 F139 H142 L143 M231 V237 S240 L134 F138 H141 L142 M230 V236 S239
BS11 CLA BB W5 Y6 R7 H9 L238 I242 F462 G465 W468 H469 R472 W4 Y5 R6 H8 L237 I241 F461 G464 W467 H468 R471
BS12 CLA BB H9 L12 L19 H23 H26 T27 I234 E235 V237 L238 S241 V245 H8 L11 L18 H22 H25 T26 I233 E234 V236 L237 S240 V244
BS13 CLA BB H9 H26 V30 W33 F462 H8 H25 V29 W32 F461
BS14 CLA BB V8 H9 M25 W115 V7 H8 M24 W114
BS15 CLA BB M138 I141 H142 L145 M137 I140 H141 L144
BS16 CLA BB I20 W113 H114 L120 I19 W112 H113 L119
Gene Ontology
Molecular Function
GO:0016168 chlorophyll binding
GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
Biological Process
GO:0009767 photosynthetic electron transport chain
GO:0009772 photosynthetic electron transport in photosystem II
GO:0015979 photosynthesis
GO:0019684 photosynthesis, light reaction
Cellular Component
GO:0009521 photosystem
GO:0009523 photosystem II
GO:0009579 thylakoid
GO:0016020 membrane
GO:0031676 plasma membrane-derived thylakoid membrane
GO:0042651 thylakoid membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4v62, PDBe:4v62, PDBj:4v62
PDBsum4v62
PubMed19219048
UniProtQ8DIQ1|PSBB_THEVB Photosystem II CP47 reaction center protein (Gene Name=psbB)

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