Structure of PDB 4v6u Chain BA

Receptor sequence
>4v6uBA (length=216) Species: 186497 (Pyrococcus furiosus DSM 3638) [Search protein sequence]
MPFDRQKIVKAVKEAKARAKPRNFTQSVEVAVNLKDIDLKRPENRFKLEV
VLPHGRGKDVKIAVIADGAVAEAARKLGLDVISSAELEEIASSPRQARKL
AKKYDFFIAEAPLMPKIGRYLGRYLGPRNKMPVVVPPTLTDLTPIVEKLK
KTVRIQLKNNPVVHAPVGTEKMSDEEIAENIEAVLNAIIGKLERGESQVK
SVYVKTTMGPAVKIEG
3D structure
PDB4v6u Promiscuous behaviour of archaeal ribosomal proteins: Implications for eukaryotic ribosome evolution.
ChainBA
Resolution6.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna BA K40 P42 K40 P42
BS02 rna BA R22 N23 F24 S27 E29 N33 K35 K58 P94 Q96 K99 K103 R123 Y124 R128 R154 Q156 N160 H164 P166 G168 R194 E196 R22 N23 F24 S27 E29 N33 K35 K58 P94 Q96 K99 K103 R123 Y124 R128 R154 Q156 N160 H164 P166 G168 R194 E196
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
GO:0006417 regulation of translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:4v6u, PDBe:4v6u, PDBj:4v6u
PDBsum4v6u
PubMed23222135
UniProtQ8TZJ9|RL1_PYRFU Large ribosomal subunit protein uL1 (Gene Name=rpl1)

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