Structure of PDB 4v76 Chain B5

Receptor sequence
>4v76B5 (length=223) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
AKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDVAVNLGID
ARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLA
DQIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAE
AVKNAKAGQVRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKP
TQAKGVYIKKVSISTTMGAGVAV
3D structure
PDB4v76 Energy barriers and driving forces in tRNA translocation through the ribosome.
ChainB5
Resolution17.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B5 R53 S55 K167 R52 S54 K166
BS02 rna B5 K3 L4 T5 K6 R7 R9 D43 V46 R162 R164 N168 I170 H172 G206 K210 S215 T216 T217 M218 K2 L3 T4 K5 R6 R8 D42 V45 R161 R163 N167 I169 H171 G205 K209 S214 T215 T216 M217
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0006417 regulation of translation
GO:0045947 negative regulation of translational initiation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4v76, PDBe:4v76, PDBj:4v76
PDBsum4v76
PubMed24186064
UniProtP0A7L0|RL1_ECOLI Large ribosomal subunit protein uL1 (Gene Name=rplA)

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